MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Lactobacillus murinus
LAC.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 225
bases: 2,084,440 bps
CDS: 1,985
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,059
Total number of protein coding genes annotated/found:
1,985
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5005|JADGKI010000073.1
SEQF5005_01443
Genome Viewer
NA
AA
135/45
3248-3382
hypothetical protein
SEQF5005|JADGKI010000080.1
SEQF5005_01986
Genome Viewer
NA
AA
135/45
712-578
hypothetical protein
SEQF5005|JADGKI010000008.1
SEQF5005_00042
Genome Viewer
NA
AA
138/46
3771-3634
hypothetical protein
SEQF5005|JADGKI010000217.1
SEQF5005_00440
Genome Viewer
NA
AA
138/46
17483-17346
hypothetical protein
SEQF5005|JADGKI010000018.1
SEQF5005_01394
Genome Viewer
NA
AA
138/46
27211-27348
hypothetical protein
SEQF5005|JADGKI010000073.1
SEQF5005_01440
Genome Viewer
NA
AA
138/46
2733-2870
hypothetical protein
SEQF5005|JADGKI010000069.1
SEQF5005_00165
Genome Viewer
NA
AA
141/47
34070-33930
hypothetical protein
SEQF5005|JADGKI010000058.1
SEQF5005_00203
Genome Viewer
NA
AA
141/47
23056-23196
hypothetical protein
SEQF5005|JADGKI010000053.1
SEQF5005_00250
Genome Viewer
NA
AA
141/47
25633-25773
hypothetical protein
SEQF5005|JADGKI010000040.1
SEQF5005_00396
Genome Viewer
NA
AA
141/47
16880-16740
hypothetical protein
SEQF5005|JADGKI010000059.1
SEQF5005_00338
Genome Viewer
NA
AA
147/49
454-600
hypothetical protein
SEQF5005|JADGKI010000040.1
SEQF5005_00395
Genome Viewer
NA
AA
147/49
16494-16348
hypothetical protein
SEQF5005|JADGKI010000073.1
SEQF5005_01444
Genome Viewer
NA
AA
147/49
3396-3542
hypothetical protein
SEQF5005|JADGKI010000011.1
SEQF5005_01975
Genome Viewer
NA
AA
147/49
3368-3514
hypothetical protein
SEQF5005|JADGKI010000069.1
SEQF5005_00142
Genome Viewer
NA
AA
150/50
4960-5109
50S ribosomal protein L33 3
SEQF5005|JADGKI010000016.1
SEQF5005_01801
Genome Viewer
NA
AA
150/50
1559-1708
hypothetical protein
SEQF5005|JADGKI010000099.1
SEQF5005_01970
Genome Viewer
NA
AA
150/50
42462-42313
50S ribosomal protein L33 1
SEQF5005|JADGKI010000012.1
SEQF5005_01910
Genome Viewer
NA
AA
153/51
2069-2221
hypothetical protein
SEQF5005|JADGKI010000112.1
SEQF5005_00585
Genome Viewer
NA
AA
162/54
10836-10675
hypothetical protein
SEQF5005|JADGKI010000022.1
SEQF5005_01883
Genome Viewer
NA
AA
162/54
2339-2178
hypothetical protein
🡄
Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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